Multiomics Assays

Protein and RNA spatial detection with CFP™

RNA ISH Assay

While RNA ISH assays may be more expensive and complex than IHC/IF, its advanced capabilities and detailed insights into gene expression make it a valuable tool for many research and diagnostic applications.

  • Leading RNA ISH assays are highly sensitive and specific for detecting target RNA molecules, even at low expression levels
  • RNA ISH allows for studies on targets not suitable for using antibodies such as secreted molecules, non-coding RNA
  • Detect viral and bacterial nucleic acids in tissue samples
  • Biomarker validation on animal tissues samples antibody availability is limited
  • Detection of pathogen and biomarkers on animal tissues.
2-Plex RNA ISH using HCR

FFPE HeLa cell pellet stained with  Molecular Instruments 2-Plex HCR MALAT1 and PPIB probes

FFPE Human Normal Breast stained with PPIB

FFPE human normal breast stained with HCR PPIB probe

Protein/RNA Co-Detection Assay

Protein/RNA co-detection

Protein/RNA co-detection using CFP on FFPE human tonsil

Multiomics solutions using CFP

CFP™ enables multiomics detection combing multiplex protein detection and RNA detection from leading RNA ISH providers. The multiomics approach offers researchers flexibility in experiment designs and provides comprehensive multimodal information that helps unveil complex biological processes.

CFP is compatible with 10x Genomics Xenium assays. It enables post-Xenium 10+ plex protein detection using the proprietary cleavable TSA based fluorophores.

*Post-Xenium slide was provided by Biochain

CFP multiomics applications:

  • Applied downstream of single-cell RNAseq, spatial transcriptomics and other spatial proteomics studies

  • Use RNA probes to replace unavailable or unspecific antibodies

  • Perform studies on targets not suitable for using antibodies such as secreted molecules

  • Offers an orthogonal way for biomarker co-expression and cross-validation in tumor micro-environment (TME), gene therapy and infectious diseases studies

Scroll to Top